Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs77111416 | chr10:63517723 | G/A | 0 | 214 | 18 | 7.92 | 2.13 | KM Plot |
| KIRP | rs77119209 | chr14:59888412 | T/C | 0.000111 | 213 | 16.43 | 16.53 | 6.63 | KM Plot |
| KIRP | rs77124415 | chr11:42225827 | C/G | 2.27E-8 | 214 | 15.88 | 15.48 | 10.6 | KM Plot |
| KIRP | rs77125767 | chr10:74950136 | A/T | 4.68E-12 | 211 | 16.45 | 13.8 | 5.6 | KM Plot |
| KIRP | rs77129799 | chr11:34870576 | T/C | 0 | 213 | 15.88 | 16.43 | 3.83 | KM Plot |
| KIRP | rs7714695 | chr5:176557445 | C/T | 7.54E-7 | 212 | 15.33 | 15.98 | 9.77 | KM Plot |
| KIRP | rs77166069 | chr12:33904905 | C/A | 1.96E-8 | 212 | 15.88 | 18 | 9 | KM Plot |
| KIRP | rs77229836 | chr21:30140661 | C/G | 0.000205 | 212 | 15.07 | 25.43 | 7.62 | KM Plot |
| KIRP | rs77240029 | chr10:70651489 | C/T | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs77259497 | chr10:70691342 | G/A | 6.91E-9 | 214 | 15.07 | 17 | 10.6 | KM Plot |
| KIRP | rs77310369 | chr11:34824169 | A/C | 0 | 213 | 15.2 | 17 | 3.83 | KM Plot |
| KIRP | rs77320255 | chr10:63482012 | C/T | 0 | 213 | 18.03 | 6.2 | 3.38 | KM Plot |
| KIRP | rs77321722 | chr11:34779085 | G/A | 0 | 214 | 15.88 | 16.72 | 3.83 | KM Plot |
| KIRP | rs77329536 | chr16:87602911 | A/G | 0 | 208 | 16.43 | 11.43 | 5.32 | KM Plot |
| KIRP | rs7733484 | chr5:36081767 | A/G | 5.67E-7 | 214 | 6.83 | 8.87 | 17.02 | KM Plot |